- Institute of Liberal Arts and Sciences (ILAS)
- Doctoral Education Consortium
- Asian Satellite Campuses Institute (ASCI)
- Nagoya University Hospital
- Nagoya University Affiliated Upper and Lower Secondary Schools
- Information and Communications
- Research Center of Health, Physical Fitness and Sports
- Institute for Advanced Study (IAS)
- Institute for Advanced Research (IAR)
- Institute of Transformative Bio‑Molecules (ITbM)
- Kobayashi-Maskawa Institute for the Origin of Particles and the Universe (KMI)
- Integrated Research Consortium on Chemical Sciences (IRCCS)
- Institutes of Innovation for Future Society
- Global Multi-campus Institute (GMC)
- Radioisotope Research Center
- Center for Gene Research
- Research Center for Materials Science
- Center for Higher Education Research
- International Center for Research and Education in Agriculture
- Nagoya University Museum
- Psychological Support & Research Center for Human Development
- Center for Asian Legal Exchange (CALE)
- Bioscience and Biotechnology Center
- Synchrotron Radiation Research Center (NUSR)
- Disaster Mitigation Research Center (DMRC)
- Cellular and Structural Physiology Institute
- Center for Brain & Mind Research
- National Composites Center Japan
- Center for Gender Diversity
- Center for Low-temperature Plasma Sciences (cLPS)
- Center for Artificial Intelligence, Mathematical and Data Science
- Institute for Glyco-core Research (iGCORE)
- Deep Tech Serial Innovation Center (D-Center)
- Language Education Center
- The Center for Digital Humanities and Social Sciences
